Computational prediction of molecular pathogen-host interactions based on dual transcriptome data

3D bioreactor ADME genes Affymetrix ammonia apoptosis BMDM BMDMs Boolean modeling Boolean Modelling CAR CellNetAnalyzer (CNA) cytochrome P450 data management database drug metabolism Evaluation documents FBA Flow Cytometry Fluidigm gene regulation glucagon signalling gluconeogenesis glycolysis HepaRG cells hepatectomy Hepatic Glycolysis hepatic metabolism Hepatocyte biochemistry hepatocyte reorganisation HepatoSys Hepcidin HGF IL-1 IL-6 inflammation inflammatory signalling insulin resistance Insulin signalling JSBML kinetic data kinetic model Kinetic Modelling kinetic models knowledge representation knowledgebase kupffer cells liver regeneration logical modelling logical networks LPS LPS showcase macrophages Matlab metabolism Microarray analysis Midterm evaluation MidtermReview miniaturized 3D bioreactor system model integration modeling modeling software modelling ModeScore mRNA expression profiles nonparenchymal cells Nuclear receptors ODE ODE model ODEfy ODEs OWL Parameter estimation poster PPARalpha presentation primary hepatocytes primary human hepatocytes primary mouse hepatocytes ProMoT PXR qPCR reaction kinetics Report review RNA interference studies SAB Meeting Leipzig 2012 SBMC 2012 SBML SBML qual SBMLsimulator SBMLsqueezer seek serum iron Show Case Steatosis Meeting Signal transduction signaling simulation simulation software Software steatosis Student Retreat 2011/Hünfeld systemic iron homeostasis TGFbeta TNFalpha Transcription factors Virtual Liver Retreat 2012 Hünfeld Virtual Liver Retreat 2013 Hünfeld VLN VLN Directorate Presentation VLN Retreat 2012 Hünfeld VLN Retreat 2013 Hünfeld zonation